barry: Your go-to motif accountant: include/barry/counters/network.hpp File Reference

barry: Your go-to motif accountant 0.0-1

Full enumeration of sample space and fast count of sufficient statistics for binary arrays

#include "network-css.hpp"

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Classes
class	NetworkData
	Data class for Networks. More...

class	NetCounterData
	Data class used to store arbitrary size_t or double vectors. More...

Macros

#define	NET_C_DATA_IDX(i) (data.indices[i])

#define	NET_C_DATA_NUM(i) (data.numbers[i])

Macros for defining counters
#define	NETWORK_COUNTER(a)

#define	NETWORK_COUNTER_LAMBDA(a)

#define	NETWORKDENSE_COUNTER_LAMBDA(a)

Macros for defining rules
#define	NETWORK_RULE(a)

#define	NETWORK_RULE_LAMBDA(a)

Functions

template<typename Tnet = Network>

void counter_edges (NetCounters< Tnet > *counters)

Number of edges. More...

template<typename Tnet = Network>

void counter_isolates (NetCounters< Tnet > *counters)

Number of isolated vertices. More...

template<>

void counter_isolates (NetCounters< NetworkDense > *counters)

template<typename Tnet = Network>

void counter_mutual (NetCounters< Tnet > *counters)

Number of mutual ties. More...

template<typename Tnet = Network>

void counter_istar2 (NetCounters< Tnet > *counters)

template<>

void counter_istar2 (NetCounters< NetworkDense > *counters)

template<typename Tnet = Network>

void counter_ostar2 (NetCounters< Tnet > *counters)

template<>

void counter_ostar2 (NetCounters< NetworkDense > *counters)

template<typename Tnet = Network>

void counter_ttriads (NetCounters< Tnet > *counters)

template<>

void counter_ttriads (NetCounters< NetworkDense > *counters)

template<typename Tnet = Network>

void counter_ctriads (NetCounters< Tnet > *counters)

template<>

void counter_ctriads (NetCounters< NetworkDense > *counters)

template<typename Tnet = Network>

void counter_density (NetCounters< Tnet > *counters)

template<typename Tnet = Network>

void counter_idegree15 (NetCounters< Tnet > *counters)

template<>

void counter_idegree15 (NetCounters< NetworkDense > *counters)

template<typename Tnet = Network>

void counter_odegree15 (NetCounters< Tnet > *counters)

template<>

void counter_odegree15 (NetCounters< NetworkDense > *counters)

template<typename Tnet = Network>

void counter_absdiff (NetCounters< Tnet > *counters, size_t attr_id, double alpha=1.0)

Sum of absolute attribute difference between ego and alter. More...

template<typename Tnet = Network>

void counter_diff (NetCounters< Tnet > *counters, size_t attr_id, double alpha=1.0, double tail_head=true)

Sum of attribute difference between ego and alter to pow(alpha) More...

NETWORK_COUNTER (init_single_attr)

template<typename Tnet = Network>

void counter_nodeicov (NetCounters< Tnet > *counters, size_t attr_id)

template<typename Tnet = Network>

void counter_nodeocov (NetCounters< Tnet > *counters, size_t attr_id)

template<typename Tnet = Network>

void counter_nodecov (NetCounters< Tnet > *counters, size_t attr_id)

template<typename Tnet = Network>

void counter_nodematch (NetCounters< Tnet > *counters, size_t attr_id)

template<typename Tnet = Network>

void counter_idegree (NetCounters< Tnet > *counters, std::vector< size_t > d)

Counts number of vertices with a given in-degree. More...

template<>

void counter_idegree (NetCounters< NetworkDense > *counters, std::vector< size_t > d)

template<typename Tnet = Network>

void counter_odegree (NetCounters< Tnet > *counters, std::vector< size_t > d)

Counts number of vertices with a given out-degree. More...

template<>

void counter_odegree (NetCounters< NetworkDense > *counters, std::vector< size_t > d)

template<typename Tnet = Network>

void counter_degree (NetCounters< Tnet > *counters, std::vector< size_t > d)

Counts number of vertices with a given out-degree. More...

Rules for network models

Parameters

rules A pointer to a NetRules object (Rules<Network, bool>).

template<typename Tnet = Network>

void rules_zerodiag (NetRules< Tnet > *rules)

Number of edges. More...

Convenient typedefs for network objects.
#define	BARRY_ZERO_NETWORK 0.0

#define	BARRY_ZERO_NETWORK_DENSE 0

typedef BArray< double, NetworkData >	Network

typedef BArrayDense< int, NetworkData >	NetworkDense

template<typename Tnet = Network>
using	NetCounter = Counter< Tnet, NetCounterData >

template<typename Tnet = Network>
using	NetCounters = Counters< Tnet, NetCounterData >

template<typename Tnet = Network>
using	NetSupport = Support< Tnet, NetCounterData >

template<typename Tnet = Network>
using	NetStatsCounter = StatsCounter< Tnet, NetCounterData >

template<typename Tnet >
using	NetModel = Model< Tnet, NetCounterData >

template<typename Tnet = Network>
using	NetRule = Rule< Tnet, bool >

template<typename Tnet = Network>
using	NetRules = Rules< Tnet, bool >

Macro Definition Documentation

◆ BARRY_ZERO_NETWORK

#define BARRY_ZERO_NETWORK 0.0

Definition at line 85 of file network.hpp.

◆ BARRY_ZERO_NETWORK_DENSE

#define BARRY_ZERO_NETWORK_DENSE 0

Definition at line 86 of file network.hpp.

◆ NET_C_DATA_IDX

#define NET_C_DATA_IDX ( i ) (data.indices[i])

Definition at line 74 of file network.hpp.

◆ NET_C_DATA_NUM

#define NET_C_DATA_NUM ( i ) (data.numbers[i])

Definition at line 75 of file network.hpp.

◆ NETWORK_COUNTER

#define NETWORK_COUNTER ( a )

Value:

template<typename Tnet = Network>\

inline double (a) (const Tnet & Array, size_t i, size_t j, NetCounterData & data)

Data class used to store arbitrary size_t or double vectors.

Definition: network.hpp:56

Data_Type &&counter_ data(std::move(counter_.data))

size_t size_t j

Definition: counters-meat.hpp:84

size_t i

Definition: counters-meat.hpp:83

Function for definition of a network counter function

Definition at line 114 of file network.hpp.

◆ NETWORK_COUNTER_LAMBDA

#define NETWORK_COUNTER_LAMBDA ( a )

Value:

Counter_fun_type<Tnet, NetCounterData> a = \

[](const Tnet & Array, size_t i, size_t j, NetCounterData & data)

Counter_fun_type

std::function< double(const Array_Type &, size_t, size_t, Data_Type &)> Counter_fun_type

Counter and rule functions.

Definition: typedefs.hpp:187

Lambda function for definition of a network counter function

Definition at line 119 of file network.hpp.

◆ NETWORK_RULE

#define NETWORK_RULE ( a )

Value:

template<typename Tnet = Network>\

inline bool (a) (const Tnet & Array, size_t i, size_t j, bool & data)

Function for definition of a network counter function

Definition at line 133 of file network.hpp.

◆ NETWORK_RULE_LAMBDA

#define NETWORK_RULE_LAMBDA ( a )

Value:

Rule_fun_type<Tnet, bool> a = \

[](const Tnet & Array, size_t i, size_t j, bool & data)

std::function< bool(const Array_Type &, size_t, size_t, Data_Type &)> Rule_fun_type

Definition: typedefs.hpp:190

Lambda function for definition of a network counter function

Definition at line 138 of file network.hpp.

◆ NETWORKDENSE_COUNTER_LAMBDA

#define NETWORKDENSE_COUNTER_LAMBDA ( a )

Value:

Counter_fun_type<NetworkDense, NetCounterData> a = \

[](const NetworkDense & Array, size_t i, size_t j, NetCounterData & data)

Baseline class for binary arrays.

Definition: barraydense-bones.hpp:33

Definition at line 123 of file network.hpp.

Typedef Documentation

◆ NetCounter

template<typename Tnet = Network>

using NetCounter = Counter<Tnet, NetCounterData >

Definition at line 89 of file network.hpp.

◆ NetCounters

template<typename Tnet = Network>

using NetCounters = Counters<Tnet, NetCounterData>

Definition at line 92 of file network.hpp.

◆ NetModel

template<typename Tnet >

using NetModel = Model<Tnet, NetCounterData>

Definition at line 101 of file network.hpp.

◆ NetRule

template<typename Tnet = Network>

using NetRule = Rule<Tnet, bool>

Definition at line 104 of file network.hpp.

◆ NetRules

template<typename Tnet = Network>

using NetRules = Rules<Tnet, bool>

Definition at line 107 of file network.hpp.

◆ NetStatsCounter

template<typename Tnet = Network>

using NetStatsCounter = StatsCounter<Tnet, NetCounterData>

Definition at line 98 of file network.hpp.

◆ NetSupport

template<typename Tnet = Network>

using NetSupport = Support<Tnet, NetCounterData >

Definition at line 95 of file network.hpp.

◆ Network

typedef BArray<double, NetworkData> Network

Definition at line 82 of file network.hpp.

◆ NetworkDense

typedef BArrayDense<int, NetworkData> NetworkDense

Definition at line 83 of file network.hpp.

Function Documentation

◆ rules_zerodiag()

template<typename Tnet = Network>

void rules_zerodiag ( NetRules< Tnet > * rules )

inline

Number of edges.

Definition at line 1381 of file network.hpp.

include
barry
counters
network.hpp
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