geese-types.hpp File Reference

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Classes
class	NodeData
	Data definition for the PhyloArray class. More...
class	PhyloCounterData
class	PhyloRuleDynData

Macros
#define	POS(a, b)   (b)*N + (a)

Typedefs
Convenient typedefs for Node objects.
typedef std::vector< std::pair< size_t, size_t > >	PhyloRuleData
typedef barry::BArrayDense< size_t, NodeData >	PhyloArray
typedef barry::Counter< PhyloArray, PhyloCounterData >	PhyloCounter
typedef barry::Counters< PhyloArray, PhyloCounterData >	PhyloCounters
typedef barry::Rule< PhyloArray, PhyloRuleData >	PhyloRule
typedef barry::Rules< PhyloArray, PhyloRuleData >	PhyloRules
typedef barry::Rule< PhyloArray, PhyloRuleDynData >	PhyloRuleDyn
typedef barry::Rules< PhyloArray, PhyloRuleDynData >	PhyloRulesDyn
typedef barry::Support< PhyloArray, PhyloCounterData, PhyloRuleData, PhyloRuleDynData >	PhyloSupport
typedef barry::StatsCounter< PhyloArray, PhyloCounterData >	PhyloStatsCounter
typedef barry::Model< PhyloArray, PhyloCounterData, PhyloRuleData, PhyloRuleDynData >	PhyloModel
typedef barry::PowerSet< PhyloArray, PhyloRuleData >	PhyloPowerSet

Macro Definition Documentation

POS

#define POS	(		a,
			b
	)		(b)*N + (a)

Definition at line 4 of file geese-types.hpp.

Typedef Documentation

PhyloArray

typedef barry::BArrayDense<size_t, NodeData> PhyloArray

Definition at line 103 of file geese-types.hpp.

PhyloCounter

typedef barry::Counter<PhyloArray, PhyloCounterData > PhyloCounter

Definition at line 104 of file geese-types.hpp.

PhyloCounters

typedef barry::Counters< PhyloArray, PhyloCounterData> PhyloCounters

Definition at line 105 of file geese-types.hpp.

PhyloModel

typedef barry::Model<PhyloArray, PhyloCounterData, PhyloRuleData, PhyloRuleDynData > PhyloModel

Definition at line 115 of file geese-types.hpp.

PhyloPowerSet

typedef barry::PowerSet<PhyloArray, PhyloRuleData> PhyloPowerSet

Definition at line 116 of file geese-types.hpp.

PhyloRule

typedef barry::Rule<PhyloArray,PhyloRuleData> PhyloRule

Definition at line 107 of file geese-types.hpp.

PhyloRuleData

typedef std::vector< std::pair< size_t, size_t > > PhyloRuleData

Definition at line 100 of file geese-types.hpp.

PhyloRuleDyn

typedef barry::Rule<PhyloArray,PhyloRuleDynData> PhyloRuleDyn

Definition at line 110 of file geese-types.hpp.

PhyloRules

typedef barry::Rules<PhyloArray,PhyloRuleData> PhyloRules

Definition at line 108 of file geese-types.hpp.

PhyloRulesDyn

typedef barry::Rules<PhyloArray,PhyloRuleDynData> PhyloRulesDyn

Definition at line 111 of file geese-types.hpp.

PhyloStatsCounter

typedef barry::StatsCounter<PhyloArray, PhyloCounterData> PhyloStatsCounter

Definition at line 114 of file geese-types.hpp.

PhyloSupport

typedef barry::Support<PhyloArray, PhyloCounterData, PhyloRuleData, PhyloRuleDynData > PhyloSupport

Definition at line 113 of file geese-types.hpp.