barry: Your go-to motif accountant
0.0-1
Full enumeration of sample space and fast count of sufficient statistics for binary arrays
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Go to the source code of this file.
Macros | |
#define | BARRAY_TYPE() BArray<Cell_Type, Data_Type> |
#define | BARRAY_TEMPLATE_ARGS() <typename Cell_Type, typename Data_Type> |
#define | BARRAY_TEMPLATE(a, b) template BARRAY_TEMPLATE_ARGS() inline a BARRAY_TYPE()::b |
#define | ROW(a) this->el_ij[a] |
#define | COL(a) this->el_ji[a] |
Functions | |
template | BARRAY_TEMPLATE_ARGS () inline void checkdim_(const BARRAY_TYPE() &lhs |
template const | BARRAY_TYPE () &rhs) |
BARRAY_TEMPLATE (BARRAY_TYPE()&, operator+=)(const BArray< Cell_Type | |
for (size_t i=0u;i< nrow();++i) for(size_t j=0u | |
j< ncol();++j) this-> | operator() (i, j)+ |
BARRAY_TEMPLATE (BARRAY_TYPE()&, operator+=)(const Cell_Type &rhs) | |
BARRAY_TEMPLATE (BARRAY_TYPE()&, operator-=)(const BArray< Cell_Type | |
BARRAY_TEMPLATE (BARRAY_TYPE()&, operator-=)(const Cell_Type &rhs) | |
BARRAY_TEMPLATE (BARRAY_TYPE()&, operator*=)(const Cell_Type &rhs) | |
BARRAY_TEMPLATE (BARRAY_TYPE()&, operator/=)(const Cell_Type &rhs) | |
Variables | |
Data_Type & | rhs |
return * | this |
#define BARRAY_TEMPLATE | ( | a, | |
b | |||
) | template BARRAY_TEMPLATE_ARGS() inline a BARRAY_TYPE()::b |
Definition at line 11 of file barray-meat-operators.hpp.
#define BARRAY_TEMPLATE_ARGS | ( | ) | <typename Cell_Type, typename Data_Type> |
Definition at line 9 of file barray-meat-operators.hpp.
#define BARRAY_TYPE | ( | ) | BArray<Cell_Type, Data_Type> |
Definition at line 7 of file barray-meat-operators.hpp.
#define COL | ( | a | ) | this->el_ji[a] |
Definition at line 15 of file barray-meat-operators.hpp.
#define ROW | ( | a | ) | this->el_ij[a] |
Definition at line 14 of file barray-meat-operators.hpp.
BARRAY_TEMPLATE | ( | BARRAY_TYPE()& | , |
operator* | |||
) | const & |
Definition at line 88 of file barray-meat-operators.hpp.
BARRAY_TEMPLATE | ( | BARRAY_TYPE()& | , |
operator+ | |||
) | const |
BARRAY_TEMPLATE | ( | BARRAY_TYPE()& | , |
operator+ | |||
) | const & |
Definition at line 46 of file barray-meat-operators.hpp.
BARRAY_TEMPLATE | ( | BARRAY_TYPE()& | , |
operator- | |||
) | const |
BARRAY_TEMPLATE | ( | BARRAY_TYPE()& | , |
operator- | |||
) | const & |
Definition at line 75 of file barray-meat-operators.hpp.
BARRAY_TEMPLATE | ( | BARRAY_TYPE()& | , |
operator/ | |||
) | const & |
Definition at line 105 of file barray-meat-operators.hpp.
template BARRAY_TEMPLATE_ARGS | ( | ) | const & |
template const BARRAY_TYPE | ( | ) | & |
Definition at line 20 of file barray-meat-operators.hpp.
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pure virtual |
Definition at line 66 of file barray-meat-operators.hpp.
Data_Type & rhs |
Definition at line 33 of file barray-meat-operators.hpp.
return * this |
Definition at line 43 of file barray-meat-operators.hpp.