pruner::Tree< Data_Type > Member List

This is the complete list of members for pruner::Tree< Data_Type >, including all inherited members.

args	pruner::Tree< Data_Type >
Data_Type (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	protected
DIST_TIPS2ROOT (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	protected
eval_fun()	pruner::Tree< Data_Type >	inline
fun	pruner::Tree< Data_Type >
get_dist_tip2root()	pruner::Tree< Data_Type >	inline
get_dist_tip2root_(uint start, uint count) (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inlineprotected
get_edgelist() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
get_offspring() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
get_offspring_ptr() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
get_parents() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
get_parents_ptr() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
get_postorder() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
get_postorder_ptr() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
get_preorder() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
get_tips() const	pruner::Tree< Data_Type >	inline
is_connected() const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
is_dag() (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
is_dag_(int i=-1, int caller=-1, bool up_search=false) (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inlineprotected
iter (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	protected
n_edges() const	pruner::Tree< Data_Type >	inline
N_EDGES (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	protected
n_nodes() const	pruner::Tree< Data_Type >	inline
N_NODES (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	protected
n_offspring(uint i) const	pruner::Tree< Data_Type >	inline
n_parents(uint i) const	pruner::Tree< Data_Type >	inline
N_TIPS (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	protected
n_tips() const	pruner::Tree< Data_Type >	inline
offspring	pruner::Tree< Data_Type >	protected
parents	pruner::Tree< Data_Type >	protected
postorder() (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inlineprotected
POSTORDER	pruner::Tree< Data_Type >	protected
postorder_(uint i) (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inlineprotected
print(bool details=true) const (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
prune_postorder()	pruner::Tree< Data_Type >	inline
prune_postorder(v_uint &seq)	pruner::Tree< Data_Type >	inline
prune_preorder()	pruner::Tree< Data_Type >	inline
prune_preorder(v_uint &seq)	pruner::Tree< Data_Type >	inline
reset_visited() (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
set_postorder(const v_uint &POSTORDER_, bool check=true) (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
TIPS	pruner::Tree< Data_Type >	protected
Tree() (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline
Tree(const v_uint &parents_, const v_uint &offspring_, uint &out)	pruner::Tree< Data_Type >	inline
TreeIterator< Data_Type > (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	friend
visit_counts	pruner::Tree< Data_Type >	protected
visited	pruner::Tree< Data_Type >	protected
~Tree() (defined in pruner::Tree< Data_Type >)	pruner::Tree< Data_Type >	inline