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Tree< Data_Type > Member List
This is the complete list of members for
Tree< Data_Type >
, including all inherited members.
args
Tree< Data_Type >
Data_Type
(defined in
Tree< Data_Type >
)
Tree< Data_Type >
protected
DIST_TIPS2ROOT
(defined in
Tree< Data_Type >
)
Tree< Data_Type >
protected
eval_fun
()
Tree< Data_Type >
inline
fun
Tree< Data_Type >
get_dist_tip2root
()
Tree< Data_Type >
inline
get_dist_tip2root_
(uint start, uint count) (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
protected
get_edgelist
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
get_offspring
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
get_offspring_ptr
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
get_parents
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
get_parents_ptr
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
get_postorder
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
get_postorder_ptr
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
get_preorder
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
get_tips
() const
Tree< Data_Type >
inline
is_connected
() const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
is_dag
() (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
is_dag_
(int i=-1, int caller=-1, bool up_search=false) (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
protected
iter
(defined in
Tree< Data_Type >
)
Tree< Data_Type >
protected
n_edges
() const
Tree< Data_Type >
inline
N_EDGES
(defined in
Tree< Data_Type >
)
Tree< Data_Type >
protected
n_nodes
() const
Tree< Data_Type >
inline
N_NODES
(defined in
Tree< Data_Type >
)
Tree< Data_Type >
protected
n_offspring
(uint i) const
Tree< Data_Type >
inline
n_parents
(uint i) const
Tree< Data_Type >
inline
N_TIPS
(defined in
Tree< Data_Type >
)
Tree< Data_Type >
protected
n_tips
() const
Tree< Data_Type >
inline
offspring
Tree< Data_Type >
protected
parents
Tree< Data_Type >
protected
postorder
() (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
protected
POSTORDER
Tree< Data_Type >
protected
postorder_
(uint i) (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
protected
print
(bool details=true) const (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
prune_postorder
()
Tree< Data_Type >
inline
prune_postorder
(v_uint &seq)
Tree< Data_Type >
inline
prune_preorder
()
Tree< Data_Type >
inline
prune_preorder
(v_uint &seq)
Tree< Data_Type >
inline
reset_visited
() (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
set_postorder
(const v_uint &POSTORDER_, bool check=true) (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
TIPS
Tree< Data_Type >
protected
Tree
() (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
Tree
(const v_uint &parents_, const v_uint &offspring_, uint &out)
Tree< Data_Type >
inline
TreeIterator< Data_Type >
(defined in
Tree< Data_Type >
)
Tree< Data_Type >
friend
visit_counts
Tree< Data_Type >
protected
visited
Tree< Data_Type >
protected
~Tree
() (defined in
Tree< Data_Type >
)
Tree< Data_Type >
inline
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