You can install jsPhyloSVG from github with:
# install.packages("devtools")
devtools::install_github("USCBiostats/jsPhyloSVG")
In the following, we present an example of usage of the widget. First, using the ape package, we create a random phylogenetic tree.
library(ape)
library(jsPhyloSVG)
x <- rtree(10)
Using the plot.ape
method, we can get a nice tree drawn with ape:
plot(x)
Using the jsPhyloSVG
function, we can visualize the same tree but using the Javascript library of the same name, jsPhyloSVG:
jsPhyloSVG(write.tree(x), width = 500)