barry: Your go-to motif accountant
0.0-1
Full enumeration of sample space and fast count of sufficient statistics for binary arrays
- g -
Geese() :
Geese
gen_hash() :
Counters< Array_Type, Data_Type >
gen_key() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_annotated_nodes() :
Geese
get_annotations() :
Geese
get_arrays2support() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_cell() :
BArray< Cell_Type, Data_Type >
,
BArrayDense< Cell_Type, Data_Type >
get_col_vec() :
BArray< Cell_Type, Data_Type >
,
BArrayDense< Cell_Type, Data_Type >
get_column_major() :
DEFM
get_counters() :
Flock
,
Geese
,
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
,
PhyloCounterData
,
StatsCounter< Array_Type, Data_Type >
,
Support< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_counts() :
Support< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_current_stats() :
Support< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_data() :
BArrayDense< Cell_Type, Data_Type >
,
FreqTable< T >
,
PowerSet< Array_Type, Data_Rule_Type >
,
Support< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_data_ptr() :
PowerSet< Array_Type, Data_Rule_Type >
get_description() :
Counter< Array_Type, Data_Type >
,
Rule< Array_Type, Data_Type >
get_descriptions() :
Counters< Array_Type, Data_Type >
,
Rules< Array_Type, Data_Type >
,
StatsCounter< Array_Type, Data_Type >
get_entries() :
BArray< Cell_Type, Data_Type >
,
BArrayDense< Cell_Type, Data_Type >
get_hasher() :
Counter< Array_Type, Data_Type >
get_ID() :
DEFM
get_index() :
FreqTable< T >
get_likelihoods() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_m_order() :
DEFM
get_model() :
DEFM
,
Flock
,
Geese
get_n_covars() :
DEFM
get_n_obs() :
DEFM
get_n_rows() :
DEFM
get_n_y() :
DEFM
get_name() :
Counter< Array_Type, Data_Type >
,
Rule< Array_Type, Data_Type >
get_names() :
Counters< Array_Type, Data_Type >
,
Rules< Array_Type, Data_Type >
,
StatsCounter< Array_Type, Data_Type >
get_normalizing_constants() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_parent() :
Node
get_probabilities() :
Geese
get_pset() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_pset_arrays() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_pset_locations() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_pset_probs() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_pset_sizes() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_pset_stats() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_rengine() :
Geese
,
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_row_vec() :
BArray< Cell_Type, Data_Type >
,
BArrayDense< Cell_Type, Data_Type >
get_rules() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
,
Support< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_rules_dyn() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
,
Support< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_seq() :
Rules< Array_Type, Data_Type >
get_states() :
Geese
get_stats_support() :
Flock
,
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_stats_support_sizes() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_stats_support_sizes_acc() :
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_stats_target() :
Flock
,
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_support_fun() :
Flock
,
Geese
,
Model< Array_Type, Data_Counter_Type, Data_Rule_Type, Data_Rule_Dyn_Type >
get_X() :
DEFM
get_X_names() :
DEFM
get_Y() :
DEFM
get_Y_names() :
DEFM
Generated on Thu Nov 16 2023 23:48:36 for barry: Your go-to motif accountant by
1.9.1