Flock Member List

This is the complete list of members for Flock, including all inherited members.

add_data(std::vector< std::vector< size_t > > &annotations, std::vector< size_t > &geneid, std::vector< int > &parent, std::vector< bool > &duplication)	Flock	inline
colnames() const	Flock	inline
dat	Flock
Flock()	Flock	inline
get_counters()	Flock	inline
get_model()	Flock	inline
get_stats_support()	Flock	inline
get_stats_target()	Flock	inline
get_support_fun()	Flock	inline
init(size_t bar_width=BARRY_PROGRESS_BAR_WIDTH)	Flock	inline
initialized	Flock
likelihood_joint(const std::vector< double > &par, bool as_log=false, bool use_reduced_sequence=true, size_t ncores=1u)	Flock	inline
model	Flock
nfunctions	Flock
nfuns() const noexcept	Flock	inline
nleafs() const noexcept	Flock	inline
nnodes() const noexcept	Flock	inline
nterms() const	Flock	inline
ntrees() const noexcept	Flock	inline
operator()(size_t i, bool check_bounds=true)	Flock	inline
parse_polytomies(bool verb=true, std::vector< size_t > *dist=nullptr) const noexcept	Flock	inline
print() const	Flock	inline
rengine	Flock
set_seed(const size_t &s)	Flock	inline
support_size() const noexcept	Flock	inline
~Flock()	Flock	inline